ReadCovPlot
Description
- ReadCovPlots visualise the proportion of reads of a library that are unmapped or mapped, showing the percentage of mapped reads by taxonomic group, as barcharts.
- ReadCovPlots can be of use for rapid taxonomic screening of multiple sequencing libraries within a single project.
- The underlying data of ReadCovPlots and additional metrics are written to tabular text files for custom analyses by the user.
Example
![A_B.vs.nt.mask.mts1.max_hsp_1.AND.A_B.vs.refprot.mask.mts1.taxified.blobDB.json.bestsumorder.order.p7.span.100.blobplot.read_cov.covsum.png 6000](https://files.readme.io/1b11133-A_B.vs.nt.mask.mts1.max_hsp_1.AND.A_B.vs.refprot.mask.mts1.taxified.blobDB.json.bestsumorder.order.p7.span.100.blobplot.read_cov.covsum.png)
ReadCovPlot of a simulated dataset
Updated about 7 years ago